Script for loading xyz files[]
The following java script can be inserted in the Jmol scripting window - It loads the files rotate them (adjust this according to your needs), writes the distances between atoms 49/50, 49/1, 49/10 and 49/30 and prints a frame in jpg format.
background white
load FILES "o2_state_tpssd3_ooh2_opt_cosmo.xyz"
"o2_state_tpssd3_react_ooh_opt_cosmo_singlet.xyz"
"o2_state_tpssd3_prod_ooh_opt_cosmo.xyz"
"o2_state_tpssd3_react_oo_opt_cosmo.xyz" "o2_state_tpssd3_oh2_opt_cosmo.xyz" "o2_state_tpssd3_react_oh_opt_cosmo_singlet.xyz"
"o2_state_tpssd3_prod_oh_opt_cosmo.xyz" "o2_state_tpssd3_o_opt_cosmo.xyz"
for (i=1; i<9; i++) {
frame @i
zoom 85
rotate x 148
rotate y 75
rotate z -92
select all; wireframe 40; monitor 49 50; monitor 49 1; monitor 49 10; monitor 49 30;
fname = "frame_a" + @{i} + ".jpg"
write jpg @{fname}
rotate z 92
rotate y -75
rotate x -148
}